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ProDom is a comprehensive set of protein domain families automatically generated from the SWISS-PROT and TrEMBL sequence databases
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Access to 2005.1/CG171 (October 31th, 2005)
  ProDom
the whole database
  ProDom-CG
Complete Genomes only (list)
  ProDom-SG
for Structural Genomics

ProDom related software
  mkdom/xdom
Generate and visualize sequence families using your own data
  fetchdom 3.0
Dig the data into the ProDom files

Previous release
 
 
What's new ?
 
  • The AC numbering scheme was modified: AC numbers are now built as follows:
    • PD or CG
    • The following pattern is then repeated three times:
      • 1 letter or number ([A-Z0-9])
      • 1 number ([0-9])
  • For example, PDA165P0 is a valid Prodom AC, and CGA165P0 is a valid ProDom-CG AC.
  • We now compute links between the ProDom families and the Gene Ontology database
 

The ProDom database is part of the InterPro project

 InterPro
 

Citation
 To cite ProDom in a publication, please use the reference [SERV2]
 
 

PRABI EMBRACE
 

© The ProDom database is copyrighted by INRA and CNRS
© TrEMBL copyright (c) 2003 EMBL-EBI
© Swiss-Prot copyright (c) 2003 SIB-EMBL-EBI
ProDom - Server maintained by Aurelie Laugraud , on behalf of the ProDom team
Graphics design Sandrine Dalmar
Last updated on October 31th, 2005.