ProDom 2002.1 Statistics

Sequence and Family Data

Proteins used to build ProDom 2002.1: non fragmentary sequences from SwissProt (Rel 40.18) + TREMBL (Rel 20.6) - May 22, 2002	481952
The clustering process was initiated with domains from the SCOP database.	rel. 1.59
domain families with at least 2 sequences	138322 (+27 % since 2001.3)
domain families	365172 (+19% since 2001.3)

Global statistics

Distribution of the number of domains per sequence

NOTE - The sequences with more than 50 domains are not shown.

---

Distribution of the radius of gyration

NOTES -

1. The families with radius of gyration higher than 200 PAM are not shown
2. Only families with at least 2 sequences are used here

---

distribution of the diameter

NOTES -

1. The families with diameter higher than 500 PAM are not shown
2. Only families with at least 2 sequences are used here

---

ProDom-SG statistics

Number of ProDom families selectionned:	137077 (82300 have no related family)
Number of ProDom families directly linked to PDB:	5710
Number of ProDom families linked to PDB via a related family:	8099
Number of ProDom families devoid of structure:	123268
Number of mono-domain proteins:	86775