| Proteins used to build ProDom 2004.1:
non fragmentary sequences from SwissProt (Rel 41.23) + TREMBL (Rel 24.11) - Sep 9, 2003 |
726272 (+30 % since 2003.1) |
|---|---|
| The clustering process was initiated with domains from the SCOP database. | rel. 1.63 |
| domain families with at least 2 sequences | 186303 (+29.0 % since 2003.1) |
| domain families | 501917 (+28% since 2003.1) |
| Families with a PDB link | 7943 |
| Families with a Prosite link (Patterns, Profiles) | 20945 |
| Families with a Pfam-A link | 137568 |
| Families with an InterPro link | 161579 |
Distribution of the number of domains per sequence
NOTE - The sequences with more than 50 domains are not shown.
Distribution of the radius of gyration
NOTES -
- The families with radius of gyration higher than 200 PAM are not shown
- Only families with at least 2 sequences are used here
distribution of the diameter
NOTES -
- The families with diameter higher than 500 PAM are not shown
- Only families with at least 2 sequences are used here
