ProDom 2004.1 Statistics
Release date June 2004

Sequence and Family Data

Proteins used to build ProDom 2004.1:
non fragmentary sequences from
SwissProt (Rel 41.23) + TREMBL (Rel 24.11) - Sep 9, 2003
726272 (+30 % since 2003.1)
The clustering process was initiated with domains from the SCOP database. rel. 1.63
domain families with at least 2 sequences186303 (+29.0 % since 2003.1)
domain families501917
(+28% since 2003.1)
Families with a PDB link 7943
Families with a Prosite link (Patterns, Profiles) 20945
Families with a Pfam-A link137568
Families with an InterPro link 161579


Global statistics

Distribution of the number of domains per sequence

NOTE - The sequences with more than 50 domains are not shown.


Distribution of the radius of gyration

NOTES -

  1. The families with radius of gyration higher than 200 PAM are not shown
  2. Only families with at least 2 sequences are used here


distribution of the diameter

NOTES -

  1. The families with diameter higher than 500 PAM are not shown
  2. Only families with at least 2 sequences are used here