| Proteins used to build ProDom
2006.1: non fragmentary sequences from SwissProt (Rel 48.7) + TREMBL (Rel 31.7) - Dec 20, 2005 |
2001128 (+87 % since 2005.1) |
|---|---|
| The clustering process was initiated with domains from the SCOP database. | rel. 1.69 |
| domain families with at least 2 sequences | 574656 (+109 % since 2005.1) |
| domain families | 1716114 (+133% since 2005.1) |
| Families with a PDB link | 35284 |
| Families with a Prosite link (Patterns, Profiles) | 2008 |
| Families with a Pfam-A link | 10291 |
| Families with an InterPro link | 10346 |
Distribution of the number of domains per sequence
NOTE - The sequences with more than 50 domains are not shown.
Distribution of the radius of gyration
NOTES -
- The families with radius of gyration higher than 200 PAM are not shown
- Only families with at least 2 sequences are used here
distribution of the diameter
NOTES -
- The families with diameter higher than 500 PAM are not shown
- Only families with at least 2 sequences are used here
