ProDom 2010.1 Statistics
Release date November 2006

Sequence and Family Data

Proteins used to build ProDom 2010.1:
non fragmentary sequences from
SwissProt (Rel 48.7) + TREMBL (Rel 31.7) - Dec 20, 2005
6118869 (+205 % since 2006.1)
The clustering process was initiated with domains from the SCOP database. rel. 1.75
domain families with at least 2 sequences 947784 (+65 % since 2006.1)
domain families 2749610
(+58% since 2006.1)
Families with a PDB link 29063
Families with a Prosite link (Patterns, Profiles) 134727
Families with a Pfam-A link 411513


Global statistics

Distribution of the number of domains per sequence

NOTE - The sequences with more than 50 domains are not shown.


Distribution of the radius of gyration

NOTES -

  1. The families with radius of gyration higher than 200 PAM are not shown
  2. Only families with at least 2 sequences are used here


distribution of the diameter

NOTES -

  1. The families with diameter higher than 500 PAM are not shown
  2. Only families with at least 2 sequences are used here