ProDom 2012.1 Statistics
Release date December 2015

Sequence and Family Data

Proteins used to build ProDom 2012.1:
non fragmentary sequences from
SwissProt + TREMBL - Dec 20, 2012
21 174 559 (+346 % since 2010.1)
The clustering process was initiated with domains from the SCOP database. rel. 1.75
domain families with at least 2 sequences 1 718 157 (+55 % since 2010.1)
domain families 3 739 157
(+74% since 2010.1)
Families with a PDB link 426 997
Families with a Prosite link (Patterns, Profiles) 128 882
Families with a Pfam-A link 823 801


Global statistics

Distribution of the number of domains per sequence

NOTE - The sequences with more than 50 domains are not shown.


Distribution of the radius of gyration

NOTES -

  1. The families with radius of gyration higher than 200 PAM are not shown
  2. Only families with at least 2 sequences are used here


distribution of the diameter

NOTES -

  1. The families with diameter higher than 500 PAM are not shown
  2. Only families with at least 2 sequences are used here