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Release CG1803

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Compare your sequence with ProDom

 

 

 

 

With frames

(1) AC = entry accession number
(2) ID = entry name


 

Search by Kingdom

Warning: this query scans only families with at least 2 domains.

archae bacteria eukaroyte

None : retrieve a list of domain without protein from archae/bacteria/eukaroyte genomes
Some : retrieve a domain only if AT LEAST ONE archae/bacteria/eukaroyte genome has a protein in the domain family
Maybe: don't care about this kingdom
All : retrieve a domain only if ALL archae/bacteria/eukaroyte genomes have a protein in the domain family

 

Which program ?
blastp (proteins) or blastx (DNA)

Which method ?
(consensus faster , multiple alignments more sensitive)

 

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ProDom - Server maintained by Dominique Guyot , on behalf of the ProDom team
Graphics design Sandrine Dalmar
Last updated on December 2nd, 2015.